omicverse.utils.geneset_prepare

omicverse.utils.geneset_prepare(geneset_path, organism='Human')[source]

Load and prepare gene sets from GMT/TXT files for enrichment analysis.

Parameters:
  • geneset_path (str) – Path to geneset file.

  • organism (str) – Organism name used for gene-symbol case normalization.

Returns:

Dictionary where keys are pathway names and values are gene symbol lists.

Return type:

dict