omicverse.single.gene_trends

omicverse.single.gene_trends(adata, pseudotime, var_names)

Fit and visualize smooth feature trends along pseudotime.

Parameters:

• adata (AnnData) – AnnData containing pseudotime and feature matrix.

• pseudotime (str) – adata.obs key used for temporal ordering.

• var_names (sequence of str) – Feature names to model along pseudotime.

Returns:

Initializes trend analysis configuration.

Return type:

None

Examples

>>> gt_obj = ov.single.gene_trends(adata_aucs, "pt_via", var_name)