omicverse.single.load_human_prior_interaction_network

omicverse.single.load_human_prior_interaction_network(dataset='nichenet', only_directed=False, force_download=False)[source]

Load one of the packaged human prior interaction networks.

Parameters:
  • dataset (str, default='nichenet') – Network source name.

  • only_directed (bool, default=False) – Keep only directed edges when edge-direction information exists.

  • force_download (bool, default=False) – Force redownload even when local cache exists.

Returns:

Two-column edge table with from and to gene symbols.

Return type:

pandas.DataFrame