omicverse.pp.regress

omicverse.pp.regress(adata, **kwargs)[source]

Regress out technical covariates from each gene.

Parameters:

  • adata (anndata.AnnData) – AnnData object with adata.obs['mito_perc'] and adata.obs['nUMIs'] already computed.

  • **kwargs – Extra options passed to backend regressors, e.g. n_jobs.

Returns:

Writes regressed expression values to adata.layers['regressed'].

Return type:

None