omicverse.pl.ccc_heatmap

omicverse.pl.ccc_heatmap(adata, *, plot_type='heatmap', comparison_adata=None, display_by='aggregation', sender_use=None, receiver_use=None, signaling=None, interaction_use=None, pair_lr_use=None, pvalue_threshold=0.05, pattern='all', color_by='score', value='sum', top_n=20, top_n_pairs=None, top_anno='bar', bottom_anno='cell', left_anno='bar', right_anno='cell', bar_value='sum', facet_by=None, pathway_method='mean', min_lr_pairs=1, min_expression=0.1, group_pathways=True, transpose=False, add_violin=False, remove_isolate=False, min_interaction_threshold=0.0, cluster_rows=False, cluster_columns=False, add_text=None, border=False, cmap='Reds', figsize=(8, 6), title=None, show=False, save=False)

Plot communication matrices as heatmaps or dot/bubble matrices.